CDS
| Accession Number | TCMCG051C12545 |
| gbkey | CDS |
| Protein Id | XP_024452075.1 |
| Location | complement(join(21731719..21731885,21731974..21733354,21733448..21734184,21734286..21734478,21735194..21735539,21735767..21735891,21735966..21736099,21736390..21736447,21736953..21737105,21737578..21738331,21738494..21738659,21738913..21739052,21739754..21739866,21740170..21740294,21740782..21740928,21741280..21741463,21741587..21741801,21741891..21742113)) |
| Gene | LOC7461338 |
| GeneID | 7461338 |
| Organism | Populus trichocarpa |
Protein
| Length | 1786aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024596307.1 |
| Definition | nuclear pore complex protein NUP214 isoform X1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Nuclear pore complex protein |
| KEGG_TC | 1.I.1 |
| KEGG_Module |
M00427
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14317
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03013
[VIEW IN KEGG] ko05169 [VIEW IN KEGG] map03013 [VIEW IN KEGG] map05169 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGTTTTGGAAAAGAGGGAGAAACAAAAACAGAATTCGAAGAAGAGAAAGAAGGAGATCATGTTGAAAGCAGCGATTACTACTTCGATAAGATTGGGAAACCCATTCCCATCCTCTCTGATCAAACTGTTTCCCCTTTTCCTTTGCAAAACCCTCCTCTTCCCTCTCGCCCCCTCGCCCTCTCCCAATCCCGCCGTCTCATCTTCGTCGCCCATCCCTCCGGGTTTCTGGTTGCGAGGACTAAAGATGTCATGGATGCCGCTATGGATATTAAGGAAAAAGGAAGCTCTTCTTCTTCGTCCATTCAACATGTCAGTCTTGTGGATGTCCCTATTGGGAAAGTTCACATTTTGACACTCTCTACTGACTCCTCTACTCTTGCTGTTTCTGTTGCTGCTCATATTCATTTCTTCCATATCCATTCCCTTCTCGATAAGGAGCAAAAACCGTCCTTCTCTTGCTCGCTGAGTGAACCATCATCATCTACTGTCAAGGACATTCAATGGAGAAGGAGACCGGACAATTCTTACCTTGTTCTTTCAAATCAGGGGAAGCTATATCATGGTGCTCTTGCTGCCGTCACCCATACTCTTAAACACATAACGGACAATGTTGATGCTGTTGAATGGAGTCTAAAAGGAAAATATATTGCTGTCGCAAGAGGGAGTCTTATCAGCATTTTGTCCTCAAATTTCAAGGAAAGGTTCAGTATATCCCTCCCATTCAGGTCATGGATTGCTGATAGTGATGATAACTGCACTGTCAAAGTGGACTCTATCAGATGGGTACGTCATGATAGTATCATTGTAGGATGCTTTCAGCAAACTGCAGATGGAAAGGAAAAAAATTACTTTCTTCAAGTAATCAGCAGAAAAGATGGCAAGATTTATGATAGTTCTTCCAAGCCAGTCGTGCTATCATTCTATGATCTATTTTCGGGTCTTGTTGACGATATTGTGCCCTATGGAAGTGGACCTTATTTATCCCTGGACTATTTAGAACAATGTGGGCTTGCAATTACAGCTAACAAGAAGAACACAGATCAGCACATTGTGTTGCTTGGTTGGTCAGTGGAGGATGAGATGAGTGAAACTGCAGTTATTGACATTGAACGAGATACTTGGCTCCCTAGGATTGAGCTTCAAGAAAACGGAGATGATAATTTGATCATGGGGCTCTGCGTTGACAAGGTTTCCCTCTATGGAAAAGTAAAAGTTGAAGTGGGTGTTGAAGAACAGAAAGAACTTTCACCCTACTGTGTTCTTATGTGTGTTACTCTTGAGGGAAAGCTTGTCATGTTCCAGGTTGCAAGTGCCACAGGAGCTAATATTCAACCAGAAGTTGATTCTTCCCTTGAGGATGAGGAAGAGGATATTGCTTTGGAACCTGAAGGGTGTGATCAGTCTAACCTTTCTTCTGGGTTGCATGAAGAAACATTGGAAGAGATATCTCTAGGTCTTCAACCACAACATGCGAGCAACAAGGAACTACAGCTCAATAAAGATGGTGGAATTCCTACACAGAAGGACCTTGTTCCTTCTGTCAAGAATGAGATTCCTGAAAAACTGGAAAAAAAATCACTTTCTGTACAACAAAGTGCGAAATTAGGGCAGTCATCTTTGAAGGCCTCATTCCCAGAGATACCTAGGGAAGTTGGATCAAATGCTTTACCAGGTGTCCCATCTCAGTCATGGGCAAGTGGAAAAGTTACATTATCAGCTTCAACTTTGATTCAAGGAAATAGACCCGATTATAATAATGTTCAAGTTGGTGCTGCAAATGTTCCTAGTGACCTTGGCAGTAAATCTTTTTGCATGAAGGATACTGCTGGTCAATCAACTTCTTTCAATGCTTCTGTTAGACCAGCTCTTGACGGGGAACAAAGAGGTTCGATTGTGTCAGGGACAATTGAATCATTGCCTGCCTTTCGAAGCTCACAGTTGTCATCTCACGAAAATTTTGCTTCAGCCAGGTCTCCAAACCACAGACTCAAGTATTCAAAAGACAACTACAAAACTTCATCCCTGAGGAGTTCGGAGCCAAACTTATCAAAACAATTTGGTAATATTAAAGAGCTAGCCAAAGAGTTGGATACACTTCTGGAATGCATTGAAGAAAAAGGTGGTTTCAGGGATGCCTGCACTGTATTTCTGAGAGGCTCAGTTGAAGCTTTGGAGGAGGGCATGGGAACTCTCTCTGAAAATTGCAGAATGTGGAAGAGCGTGATGGATGAGCGGCTTGGAGAGATCCATCATCTTCTAGATAAAACTGTGCAAGTTTTGGCAAGGAAAATATATGTAGACGGTATTGTCAAGCAAGCTTCTGATAGCCAATATTTGGAACTCTGGAATCGCCAAAAGTTGAGCTCTGAACTTGAGTTGAAGCGGCGGTGTATACTAAAACTAAATCAGGAGTTGACTAATCAGTTGATTCAATTGGAGAGACACTTCAATACCCTTGAACTTCAAAGTTTTGGTGGAAATGCTGGATTTCACACAGATCGGAGAACTTTGCAGATTAGATATATGCCTTCAAGACAACTTCAGTCCTTGCATAGTTTACAAAACACAATGAGTTCACAGTTAGCAGCTGCTGAACAACTTTCTGAATGTCTCTCAAAACAAATGTCCATGCTGAGTATAGAGTCACCTGTAAGACAAAAGAATGTCAAGAAGGAACTTTTTGAAACAATTGGAATCCCGTATGATGCCTCTTTTAGCTCACCAGATGCAACGAAAGTTGGTGATACCACTTCATTGAAGAAACTTTTACTTTCTTCGGGTTCTGCTGCCACTAAAGGTAAGTCTAGGAGACACCAATCAAGTGCTATGAAAAGTTCTGATTCAGAAACTTCAAGGAGAAGGAGGGACTCGCTTGATCAGAGCTGGGCTAGTTTTGAGCCTACGAAAACAACTGTAAAAAGGGTGCTTTTGCAAGAAAATCAGAAGAAAAATGTGAATAAATCATTCTTGTTGAAGGATAGGCAAATTTTTAGTTCTGGCTTGGGGGACATATCCACAGTTCACCAAGAAGACCAGACATCCCGTTCTTTCTTGCACCCATTGGAAAGCAAAGCAGGCCTTCATTATGGATCCCCTAAACAAACGTTTGAGAAAAAACCAACCGTTCCATGTAAATGGGCTACTGATCCTCCAATGTCATCACAGCCTCTGGGCTTGCGTTCTCCTATACTGCAAAATAACAATGTAGCGATGGTATCAGTTTCGTCATCACTGGTATCACTGCCAGGAGGAGAAATACGTAGCAGGGAAGCCTACAATATGACTGCAGATAAATCTAAGAGTATGTTTTCTCAAATTGAGAAGCCTGATTCTGTTTCCACCAATGAGACCAGACATATTCAGCAAACTGAAACTAGGATAAATAAAAATTCAGCAGACTCTACCGTGCCACCAATGCAGACACCTTCGTTTCCAAAGAAACCAAATGAGATTCCTGTTTCAACTACCAGTAGCGTGCTTGCAAAGTCAGCAATGCAAAGTGTGAGGCCTGGACCAGCAGACACCAAAAGTTCATTTTTCGAATCTCCCAATAAAGATTATGAGCCTCCGCACTCTTTGTTAGGTGCCTCTTCTGTGGCTCCCACCCAACCTGGAAAAGTTCCTGAGATCAATTTTGCTACTAGCAAAAGCCAGCCTAGTGAAAAAGTTTCATCTTCTCCATCAGCCTTCATATCGCATGCAGTTTCATCATCTCTGATGTCCAATATATCACCAAACATCTCATCATCAACATCTGCACAGATGTCGTCAGCTGCAATGTCACCGAGCACATCTTTAACCAGTTCTAAGGTCCCCAGGACAGAGCTACCATCACATGCTCCACCTCTAACTTCAGAGGTTTCTCCAGAGCTGCAACCCCCTCTAGGGAAAACTCTGCCTTCTAGCAATCCAGGTCCTTCATGTTTGACATCAGAATCCCTTGAAACAGATATTCAGCCTCTTATGGAAAAACCTGCACGTAATGTAAACCCCACTCCTACACCTTCAGTGTCAGAATCACTTAAAACAGAGCCCCAACCTCCTGCTGGAAAAAATCCACCTTCTGTCACTCCAACGACCCCTACCCCTTCAGCATCAGAGTCCCCCAAAACAGAGGTTCCACATCCTACGGGTGAAGTAAGTTCAAAATCAGATGTGGGTGTTCCTGCAACTGCTCCACACCCTAACCCAACTACATTTGGTTTGAAGCTTGAACCTTCGGCATCATCTGTCCTTGCTACAGGACTATCAACTGGATTTGCACCAGTAACCCAGCCCAGCTTGAATCACTCTGGAAGTACTGCATCTAAGGTGGCTCTGAATTCTCAACCTCAACAGCCATCTTCTCATAATGTTCCTTTTGGAGCACCAATCCCGACTTCTGATAGCGTTAGTGGAAAGAATGAAAGTTTGGATGTTGCAGTTACAGAAGAGGTTGAAATGGAGGAGGAGGCTCCTGAGGCTAGCTGCACAAATGAACTTAATTTGGGAAATCTTGGAGGTTTTGGGATTGGTTCAACCCCTATCCCAACTGCTCCTAGAGCAAATCCATTTGGCAGTCCATTTGGTAGCACGGGATCAAATGTAGCAAGCTCTTCGTTGACCATGACTGTGCCTAGTGGAGAGCTCTTTCGACCTGCCTCTTTCAACTTTCAATCTCCTCAGCCATCCCAAAAGCCTCCACCAACAAATATGGGTGCTTTCTCTGGTGGCTTTGGCACAGGAGCAGTTGCTCAAGCTCCTGCTCAAAGTCAGTTTGGCCAGCCAGCACATATTGGATCAGGACAGCAAGCACTGGGATCAGTTCTTGGGACTTTTGGGCAGTCGAGACAGTTTGGAACTGGTTTACCTGGAAGTGGTTTCGCTCCTACCAGTGGTTTTGGTGGTGGCCTTGCTACTAGTAGTTCAACAGGTGGCTTTGCAAGTGCTGCAACTGCTGGCGGGTTTGCTGGTGCTGCTTCTACTGGTGGTGGATTTGCTGCTTTGGCCTCATCTGGTGCAGGATTTGCTGGTGTGGCTGCTGGGGGTGGGTTTAGTAGTGTAGCTTCTGGTGTTGGGTTTGGTGGAGTGGCTTCTGGTGGCAGTGGCATTGCTGGTGTGGCTTCAGGTGGAGGTGGATTTGCCGCAGCAGCCTCAAGTGCTGGTGGTTTCGCAGCAGCGCCTGCATCTGGTAGTGGATTTGGTACATCAGGTAGTGGATTTGGGGCTTTTGGCAGCCAACAAGGTACTGGAGGATTCTCAGGTTTTCCTGGTAATGCAGGAGGCAGCCAACAAGGAATTGGTGGATTCTCTGCTTTCAGTGGTAATCCAGCAGGAACTGGAAAACCTGCGGAATTATTTACACAGATGAGAAAATAG |
| Protein: MGFGKEGETKTEFEEEKEGDHVESSDYYFDKIGKPIPILSDQTVSPFPLQNPPLPSRPLALSQSRRLIFVAHPSGFLVARTKDVMDAAMDIKEKGSSSSSSIQHVSLVDVPIGKVHILTLSTDSSTLAVSVAAHIHFFHIHSLLDKEQKPSFSCSLSEPSSSTVKDIQWRRRPDNSYLVLSNQGKLYHGALAAVTHTLKHITDNVDAVEWSLKGKYIAVARGSLISILSSNFKERFSISLPFRSWIADSDDNCTVKVDSIRWVRHDSIIVGCFQQTADGKEKNYFLQVISRKDGKIYDSSSKPVVLSFYDLFSGLVDDIVPYGSGPYLSLDYLEQCGLAITANKKNTDQHIVLLGWSVEDEMSETAVIDIERDTWLPRIELQENGDDNLIMGLCVDKVSLYGKVKVEVGVEEQKELSPYCVLMCVTLEGKLVMFQVASATGANIQPEVDSSLEDEEEDIALEPEGCDQSNLSSGLHEETLEEISLGLQPQHASNKELQLNKDGGIPTQKDLVPSVKNEIPEKLEKKSLSVQQSAKLGQSSLKASFPEIPREVGSNALPGVPSQSWASGKVTLSASTLIQGNRPDYNNVQVGAANVPSDLGSKSFCMKDTAGQSTSFNASVRPALDGEQRGSIVSGTIESLPAFRSSQLSSHENFASARSPNHRLKYSKDNYKTSSLRSSEPNLSKQFGNIKELAKELDTLLECIEEKGGFRDACTVFLRGSVEALEEGMGTLSENCRMWKSVMDERLGEIHHLLDKTVQVLARKIYVDGIVKQASDSQYLELWNRQKLSSELELKRRCILKLNQELTNQLIQLERHFNTLELQSFGGNAGFHTDRRTLQIRYMPSRQLQSLHSLQNTMSSQLAAAEQLSECLSKQMSMLSIESPVRQKNVKKELFETIGIPYDASFSSPDATKVGDTTSLKKLLLSSGSAATKGKSRRHQSSAMKSSDSETSRRRRDSLDQSWASFEPTKTTVKRVLLQENQKKNVNKSFLLKDRQIFSSGLGDISTVHQEDQTSRSFLHPLESKAGLHYGSPKQTFEKKPTVPCKWATDPPMSSQPLGLRSPILQNNNVAMVSVSSSLVSLPGGEIRSREAYNMTADKSKSMFSQIEKPDSVSTNETRHIQQTETRINKNSADSTVPPMQTPSFPKKPNEIPVSTTSSVLAKSAMQSVRPGPADTKSSFFESPNKDYEPPHSLLGASSVAPTQPGKVPEINFATSKSQPSEKVSSSPSAFISHAVSSSLMSNISPNISSSTSAQMSSAAMSPSTSLTSSKVPRTELPSHAPPLTSEVSPELQPPLGKTLPSSNPGPSCLTSESLETDIQPLMEKPARNVNPTPTPSVSESLKTEPQPPAGKNPPSVTPTTPTPSASESPKTEVPHPTGEVSSKSDVGVPATAPHPNPTTFGLKLEPSASSVLATGLSTGFAPVTQPSLNHSGSTASKVALNSQPQQPSSHNVPFGAPIPTSDSVSGKNESLDVAVTEEVEMEEEAPEASCTNELNLGNLGGFGIGSTPIPTAPRANPFGSPFGSTGSNVASSSLTMTVPSGELFRPASFNFQSPQPSQKPPPTNMGAFSGGFGTGAVAQAPAQSQFGQPAHIGSGQQALGSVLGTFGQSRQFGTGLPGSGFAPTSGFGGGLATSSSTGGFASAATAGGFAGAASTGGGFAALASSGAGFAGVAAGGGFSSVASGVGFGGVASGGSGIAGVASGGGGFAAAASSAGGFAAAPASGSGFGTSGSGFGAFGSQQGTGGFSGFPGNAGGSQQGIGGFSAFSGNPAGTGKPAELFTQMRK |